I'm still running upgrade testing of the Lenny Gnome and KDE Desktop, but have not had time to spend on reporting the status. Here is a short update based on a test I ran 20101118.
I still do not know what a correct migration should look like, so I report any differences between apt and aptitude and hope someone else can see if anything should be changed.
This is for Gnome:
Installed using apt-get, missing with aptitude
Installed using apt-get, removed with aptitudeapache2.2-bin aptdaemon at-spi baobab binfmt-support browser-plugin-gnash cheese-common cli-common cpp-4.3 cups-pk-helper dmz-cursor-theme empathy empathy-common finger freedesktop-sound-theme freeglut3 gconf-defaults-service gdm-themes gedit-plugins geoclue geoclue-hostip geoclue-localnet geoclue-manual geoclue-yahoo gnash gnash-common gnome gnome-backgrounds gnome-cards-data gnome-codec-install gnome-core gnome-desktop-environment gnome-disk-utility gnome-screenshot gnome-search-tool gnome-session-canberra gnome-spell gnome-system-log gnome-themes-extras gnome-themes-more gnome-user-share gs-common gstreamer0.10-fluendo-mp3 gstreamer0.10-tools gtk2-engines gtk2-engines-pixbuf gtk2-engines-smooth hal-info hamster-applet libapache2-mod-dnssd libapr1 libaprutil1 libaprutil1-dbd-sqlite3 libaprutil1-ldap libart2.0-cil libatspi1.0-0 libboost-date-time1.42.0 libboost-python1.42.0 libboost-thread1.42.0 libchamplain-0.4-0 libchamplain-gtk-0.4-0 libcheese-gtk18 libclutter-gtk-0.10-0 libcryptui0 libcupsys2 libdiscid0 libeel2-data libelf1 libepc-1.0-2 libepc-common libepc-ui-1.0-2 libfreerdp-plugins-standard libfreerdp0 libgail-common libgconf2.0-cil libgdata-common libgdata7 libgdl-1-common libgdu-gtk0 libgee2 libgeoclue0 libgexiv2-0 libgif4 libglade2.0-cil libglib2.0-cil libgmime2.4-cil libgnome-vfs2.0-cil libgnome2.24-cil libgnomepanel2.24-cil libgnomeprint2.2-data libgnomeprintui2.2-common libgnomevfs2-bin libgpod-common libgpod4 libgtk2.0-cil libgtkglext1 libgtksourceview-common libgtksourceview2.0-common libmono-addins-gui0.2-cil libmono-addins0.2-cil libmono-cairo2.0-cil libmono-corlib2.0-cil libmono-i18n-west2.0-cil libmono-posix2.0-cil libmono-security2.0-cil libmono-sharpzip2.84-cil libmono-system2.0-cil libmtp8 libmusicbrainz3-6 libndesk-dbus-glib1.0-cil libndesk-dbus1.0-cil libopal3.6.8 libpolkit-gtk-1-0 libpt-1.10.10-plugins-alsa libpt-1.10.10-plugins-v4l libpt2.6.7 libpython2.6 librpm1 librpmio1 libsdl1.2debian libservlet2.4-java libsrtp0 libssh-4 libtelepathy-farsight0 libtelepathy-glib0 libtidy-0.99-0 libxalan2-java libxerces2-java media-player-info mesa-utils mono-2.0-gac mono-gac mono-runtime nautilus-sendto nautilus-sendto-empathy openoffice.org-writer2latex openssl-blacklist p7zip p7zip-full pkg-config python-4suite-xml python-aptdaemon python-aptdaemon-gtk python-axiom python-beautifulsoup python-bugbuddy python-clientform python-coherence python-configobj python-crypto python-cupshelpers python-cupsutils python-eggtrayicon python-elementtree python-epsilon python-evolution python-feedparser python-gdata python-gdbm python-gst0.10 python-gtkglext1 python-gtkmozembed python-gtksourceview2 python-httplib2 python-louie python-mako python-markupsafe python-mechanize python-nevow python-notify python-opengl python-openssl python-pam python-pkg-resources python-pyasn1 python-pysqlite2 python-rdflib python-serial python-tagpy python-twisted-bin python-twisted-conch python-twisted-core python-twisted-web python-utidylib python-webkit python-xdg python-zope.interface remmina remmina-plugin-data remmina-plugin-rdp remmina-plugin-vnc rhythmbox-plugin-cdrecorder rhythmbox-plugins rpm-common rpm2cpio seahorse-plugins shotwell software-center svgalibg1 system-config-printer-udev telepathy-gabble telepathy-mission-control-5 telepathy-salut tomboy totem totem-coherence totem-mozilla totem-plugins transmission-common xdg-user-dirs xdg-user-dirs-gtk xserver-xephyr zip
arj bluez-utils cheese dhcdbd djvulibre-desktop ekiga eog epiphany-extensions epiphany-gecko evolution-exchange fast-user-switch-applet file-roller gcalctool gconf-editor gdm gedit gedit-common gnome-app-install gnome-games gnome-games-data gnome-nettool gnome-system-tools gnome-themes gnome-utils gnome-vfs-obexftp gnome-volume-manager gnuchess gucharmap guile-1.8-libs hal libavahi-compat-libdnssd1 libavahi-core5 libavahi-ui0 libbind9-50 libbluetooth2 libcamel1.2-11 libcdio7 libcucul0 libcurl3 libdirectfb-1.0-0 libdmx1 libdvdread3 libedata-cal1.2-6 libedataserver1.2-9 libeel2-2.20 libepc-1.0-1 libepc-ui-1.0-1 libexchange-storage1.2-3 libfaad0 libgadu3 libgalago3 libgd2-noxpm libgda3-3 libgda3-common libggz2 libggzcore9 libggzmod4 libgksu1.2-0 libgksuui1.0-1 libgmyth0 libgnome-desktop-2 libgnome-pilot2 libgnomecups1.0-1 libgnomeprint2.2-0 libgnomeprintui2.2-0 libgpod3 libgraphviz4 libgtk-vnc-1.0-0 libgtkhtml2-0 libgtksourceview1.0-0 libgtksourceview2.0-0 libgucharmap6 libhesiod0 libicu38 libisccc50 libisccfg50 libiw29 libjaxp1.3-java-gcj libkpathsea4 liblircclient0 libltdl3 liblwres50 libmagick++10 libmagick10 libmalaga7 libmozjs1d libmpfr1ldbl libmtp7 libmysqlclient15off libnautilus-burn4 libneon27 libnm-glib0 libnm-util0 libopal-2.2 libosp5 libparted1.8-10 libpisock9 libpisync1 libpoppler-glib3 libpoppler3 libpt-1.10.10 libraw1394-8 libsdl1.2debian-alsa libsensors3 libsexy2 libsmbios2 libsoup2.2-8 libspeexdsp1 libssh2-1 libsuitesparse-3.1.0 libsvga1 libswfdec-0.6-90 libtalloc1 libtotem-plparser10 libtrackerclient0 libvoikko1 libxalan2-java-gcj libxerces2-java-gcj libxklavier12 libxtrap6 libxxf86misc1 libzephyr3 mysql-common rhythmbox seahorse sound-juicer swfdec-gnome system-config-printer totem-common totem-gstreamer transmission-gtk vinagre vino w3c-dtd-xhtml wodim
Installed using aptitude, missing with apt-get
gstreamer0.10-gnomevfs
Installed using aptitude, removed with apt-get
[nothing]
This is for KDE:
Installed using apt-get, missing with aptitude
autopoint bomber bovo cantor cantor-backend-kalgebra cpp-4.3 dcoprss edict espeak espeak-data eyesapplet fifteenapplet finger gettext ghostscript-x git gnome-audio gnugo granatier gs-common gstreamer0.10-pulseaudio indi kaddressbook-plugins kalgebra kalzium-data kanjidic kapman kate-plugins kblocks kbreakout kbstate kde-icons-mono kdeaccessibility kdeaddons-kfile-plugins kdeadmin-kfile-plugins kdeartwork-misc kdeartwork-theme-window kdeedu kdeedu-data kdeedu-kvtml-data kdegames kdegames-card-data kdegames-mahjongg-data kdegraphics-kfile-plugins kdelirc kdemultimedia-kfile-plugins kdenetwork-kfile-plugins kdepim-kfile-plugins kdepim-kio-plugins kdessh kdetoys kdewebdev kdiamond kdnssd kfilereplace kfourinline kgeography-data kigo killbots kiriki klettres-data kmoon kmrml knewsticker-scripts kollision kpf krosspython ksirk ksmserver ksquares kstars-data ksudoku kubrick kweather libasound2-plugins libboost-python1.42.0 libcfitsio3 libconvert-binhex-perl libcrypt-ssleay-perl libdb4.6++ libdjvulibre-text libdotconf1.0 liberror-perl libespeak1 libfinance-quote-perl libgail-common libgsl0ldbl libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl libhtml-tree-perl libio-stringy-perl libkdeedu4 libkdegames5 libkiten4 libkpathsea5 libkrossui4 libmailtools-perl libmime-tools-perl libnews-nntpclient-perl libopenbabel3 libportaudio2 libpulse-browse0 libservlet2.4-java libspeechd2 libtiff-tools libtimedate-perl libunistring0 liburi-perl libwww-perl libxalan2-java libxerces2-java lirc luatex marble networkstatus noatun-plugins openoffice.org-writer2latex palapeli palapeli-data parley parley-data poster psutils pulseaudio pulseaudio-esound-compat pulseaudio-module-x11 pulseaudio-utils quanta-data rocs rsync speech-dispatcher step svgalibg1 texlive-binaries texlive-luatex ttf-sazanami-gothic
Installed using apt-get, removed with aptitude
amor artsbuilder atlantik atlantikdesigner blinken bluez-utils cvs dhcdbd djvulibre-desktop imlib-base imlib11 kalzium kanagram kandy kasteroids katomic kbackgammon kbattleship kblackbox kbounce kbruch kcron kdat kdemultimedia-kappfinder-data kdeprint kdict kdvi kedit keduca kenolaba kfax kfaxview kfouleggs kgeography kghostview kgoldrunner khangman khexedit kiconedit kig kimagemapeditor kitchensync kiten kjumpingcube klatin klettres klickety klines klinkstatus kmag kmahjongg kmailcvt kmenuedit kmid kmilo kmines kmousetool kmouth kmplot knetwalk kodo kolf kommander konquest kooka kpager kpat kpdf kpercentage kpilot kpoker kpovmodeler krec kregexpeditor kreversi ksame ksayit kshisen ksig ksim ksirc ksirtet ksmiletris ksnake ksokoban kspaceduel kstars ksvg ksysv kteatime ktip ktnef ktouch ktron kttsd ktuberling kturtle ktux kuickshow kverbos kview kviewshell kvoctrain kwifimanager kwin kwin4 kwordquiz kworldclock kxsldbg libakode2 libarts1-akode libarts1-audiofile libarts1-mpeglib libarts1-xine libavahi-compat-libdnssd1 libavahi-core5 libavc1394-0 libbind9-50 libbluetooth2 libboost-python1.34.1 libcucul0 libcurl3 libcvsservice0 libdirectfb-1.0-0 libdjvulibre21 libdvdread3 libfaad0 libfreebob0 libgd2-noxpm libgraphviz4 libgsmme1c2a libgtkhtml2-0 libicu38 libiec61883-0 libindex0 libisccc50 libisccfg50 libiw29 libjaxp1.3-java-gcj libk3b3 libkcal2b libkcddb1 libkdeedu3 libkdegames1 libkdepim1a libkgantt0 libkleopatra1 libkmime2 libkpathsea4 libkpimexchange1 libkpimidentities1 libkscan1 libksieve0 libktnef1 liblockdev1 libltdl3 liblwres50 libmagick10 libmimelib1c2a libmodplug0c2 libmozjs1d libmpcdec3 libmpfr1ldbl libneon27 libnm-util0 libopensync0 libpisock9 libpoppler-glib3 libpoppler-qt2 libpoppler3 libraw1394-8 librss1 libsensors3 libsmbios2 libssh2-1 libsuitesparse-3.1.0 libswfdec-0.6-90 libtalloc1 libxalan2-java-gcj libxerces2-java-gcj libxtrap6 lskat mpeglib network-manager-kde noatun pmount tex-common texlive-base texlive-common texlive-doc-base texlive-fonts-recommended tidy ttf-dustin ttf-kochi-gothic ttf-sjfonts
Installed using aptitude, missing with apt-get
dolphin kde-core kde-plasma-desktop kde-standard kde-window-manager kdeartwork kdebase kdebase-apps kdebase-workspace kdebase-workspace-bin kdebase-workspace-data kdeutils kscreensaver kscreensaver-xsavers libgle3 libkonq5 libkonq5-templates libnetpbm10 netpbm plasma-widget-folderview plasma-widget-networkmanagement xscreensaver-data-extra xscreensaver-gl xscreensaver-gl-extra xscreensaver-screensaver-bsod
Installed using aptitude, removed with apt-get
kdebase-bin konq-plugins konqueror